NAME

csg_gmxtopol - Part of the VOTCA package

SYNOPSIS

csg_gmxtopol [OPTIONS]

csg_gmxtopol [–help]

DESCRIPTION

Create skeleton for gromacs topology based on atomistic topology and a mapping file. File still needs to be modified by the user.

OPTIONS

Allowed options:

  -h [ --help ]            display this help and exit
  --verbose                be loud and noisy
  --verbose1               be very loud and noisy
  -v [ --verbose2 ]        be extremly loud and noisy
  --top arg                atomistic topology file
  --out arg              output topology (will create .top and in future also
                         .itp)

Mapping options:

  --cg arg                 coarse graining mapping and bond definitions
                         (xml-file)
  --map-ignore arg         list of molecules to ignore separated by ;
  --no-map                 disable mapping and act on original trajectory